Commit 812f7e50 authored by Karl Kornel's avatar Karl Kornel
Browse files

Fix some syntax bugs

parent 3ddf9769

bbox-workflow-nextseq

+3 −3
Original line number Diff line number Diff line
@@ -413,7 +413,7 @@ EOF 
        dolog("A SampleSheet.csv already exists.  Not copying from gdrive\n");

    } else {

        dolog("Downloading samplesheet for ${LIBRARYID} from Google Drive.\n");

        $drive_exit_code = drive_run($DRIVECOMMAND, $LIBRARYID,

        my $drive_exit_code = drive_run($DRIVECOMMAND, $LIBRARYID,

                                "$RUNFOLDER/SampleSheet.csv");



        # Make sure drive exited OK
@@ -701,7 +701,7 @@ EOF 
    my $search_buffer = '';

    my $search_pid;

    eval {

        $search_pid = open3($search_inhande, $results_handle, $results_handle,

        $search_pid = open3($search_inhandle, $results_handle, $results_handle,

                        @drive_options);

    };

    if ($@) {
@@ -744,7 +744,7 @@ EOF 
    }



    # NOW we can finally get our file!

    my @drive_options = (

    @drive_options = (

        $command_path,

        'download',

        '--stdout',