Loading bbox-workflow-nextseq +18 −15 Original line number Diff line number Diff line Loading @@ -294,9 +294,10 @@ EOL # If we timed out, then exit. if ($TIMEOUT2 == 0) { dolog("Gave up waiting for $RUNFOLDER/RTAComplete.txt\n"); log_failure("Gave up waiting for RTAComplete.txt to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Gave up waiting for RTAComplete.txt to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } Loading @@ -316,9 +317,10 @@ EOL # If we timed out, then exit. if ($TIMEOUT2 == 0) { dolog("Gave up waiting for $RUNFOLDER/RunCompletionStatus.xml\n"); log_failure("Gave up waiting for RunCompletionStatus.xml to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Gave up waiting for RunCompletionStatus.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } Loading @@ -331,9 +333,9 @@ We got an error when trying to open RunCompletionStatus.xml. The full path we tried to open is: $RUNFOLDER/RunCompletionStatus.xml The error we got is: $! EOF log_failure("Could not open RunCompletionStatus.xml", 'run', email_failure("Could not open RunCompletionStatus.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); $LOGPATH, \$LOG, $RealBin, $RealScript); return; }; while (my $line = <$runcompletion_handle>) { Loading @@ -350,9 +352,10 @@ EOF We have a completed run, but the CompletionStatus is not "CompletedAsPlanned". The completion status we found is: $1 EOF log_failure("Un-good CompletionStatus", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Un-good CompletionStatus", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } } Loading @@ -368,9 +371,9 @@ We got an error when trying to open RunParameters.xml. The full path we tried to open is: $RUNFOLDER/RunParameters.xml The error we got is: $! EOF log_failure("Could not open RunParameters.xml", 'run', email_failure("Could not open RunParameters.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); $LOGPATH, \$LOG, $RealBin, $RealScript); return; }; while (my $line = <$runparameters_handle>) { Loading Loading
bbox-workflow-nextseq +18 −15 Original line number Diff line number Diff line Loading @@ -294,9 +294,10 @@ EOL # If we timed out, then exit. if ($TIMEOUT2 == 0) { dolog("Gave up waiting for $RUNFOLDER/RTAComplete.txt\n"); log_failure("Gave up waiting for RTAComplete.txt to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Gave up waiting for RTAComplete.txt to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } Loading @@ -316,9 +317,10 @@ EOL # If we timed out, then exit. if ($TIMEOUT2 == 0) { dolog("Gave up waiting for $RUNFOLDER/RunCompletionStatus.xml\n"); log_failure("Gave up waiting for RunCompletionStatus.xml to appear", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Gave up waiting for RunCompletionStatus.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } Loading @@ -331,9 +333,9 @@ We got an error when trying to open RunCompletionStatus.xml. The full path we tried to open is: $RUNFOLDER/RunCompletionStatus.xml The error we got is: $! EOF log_failure("Could not open RunCompletionStatus.xml", 'run', email_failure("Could not open RunCompletionStatus.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); $LOGPATH, \$LOG, $RealBin, $RealScript); return; }; while (my $line = <$runcompletion_handle>) { Loading @@ -350,9 +352,10 @@ EOF We have a completed run, but the CompletionStatus is not "CompletedAsPlanned". The completion status we found is: $1 EOF log_failure("Un-good CompletionStatus", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); email_failure("Un-good CompletionStatus", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return; } } Loading @@ -368,9 +371,9 @@ We got an error when trying to open RunParameters.xml. The full path we tried to open is: $RUNFOLDER/RunParameters.xml The error we got is: $! EOF log_failure("Could not open RunParameters.xml", 'run', email_failure("Could not open RunParameters.xml", 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, $LOG); $LOGPATH, \$LOG, $RealBin, $RealScript); return; }; while (my $line = <$runparameters_handle>) { Loading