Loading bbox-workflow-nextseq +14 −1 Original line number Diff line number Diff line Loading @@ -731,7 +731,20 @@ EOF # Grab the second line. # Next, split the retrieved line into space-separated fields. # The first field is our UID. my ($file_uid, $file_name) = (split(/\s+/, (split(/\n/, $search_output))[1]))[0,1]; my @search_lines = split(/\n/, $search_output); if (scalar(@search_lines) < 2) { dolog(<<"EOF"); We could not find a matching sample sheet for this library ID. The library ID is: $library_id Please make sure the samplesheet name starts with "$library_id SampleSheet", and that the name ends in '.csv'. EOF email_failure('Unable to find matching samplesheet', 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return undef; } my ($file_uid, $file_name) = (split(/\s+/, $search_lines[1]))[0,1]; if (!defined($file_uid) or !$file_uid) { dolog(<<"EOF"); We could not find a matching sample sheet for this library ID. Loading Loading
bbox-workflow-nextseq +14 −1 Original line number Diff line number Diff line Loading @@ -731,7 +731,20 @@ EOF # Grab the second line. # Next, split the retrieved line into space-separated fields. # The first field is our UID. my ($file_uid, $file_name) = (split(/\s+/, (split(/\n/, $search_output))[1]))[0,1]; my @search_lines = split(/\n/, $search_output); if (scalar(@search_lines) < 2) { dolog(<<"EOF"); We could not find a matching sample sheet for this library ID. The library ID is: $library_id Please make sure the samplesheet name starts with "$library_id SampleSheet", and that the name ends in '.csv'. EOF email_failure('Unable to find matching samplesheet', 'run', $RUNFOLDER, "$RealBin/email-recipients.txt", $LOGPATH, \$LOG, $RealBin, $RealScript); return undef; } my ($file_uid, $file_name) = (split(/\s+/, $search_lines[1]))[0,1]; if (!defined($file_uid) or !$file_uid) { dolog(<<"EOF"); We could not find a matching sample sheet for this library ID. Loading